Flavobacterium sp. AJR

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sp. AJR is characterized as a rod-shaped bacterium, which is a defining feature of its morphology. This species possesses flagella, indicating that it is motile, allowing it to navigate its environment effectively. Flavobacterium sp. AJR has a single replicon, which is significant for understanding its genetic structure and replication process. The genomic information for Flavobacterium sp. AJR is cataloged under the accession NCWQ00000000.1. This accession number serves as a reference for researchers seeking to explore its genetic makeup and potential applications in various fields. Flavobacterium species are often associated with aquatic environments and play a crucial role in the degradation of organic matter. Their ability to break down complex organic compounds is essential in nutrient cycling within ecosystems. The motility provided by flagella can aid in the colonization of specific niches, enhancing their ecological role. In summary, Flavobacterium sp. AJR exhibits rod-shaped morphology, possesses flagella, and has a single replicon, with its genetic information available under a specific accession number. The ecological significance of this bacterium lies in its potential contributions to organic matter degradation in aquatic ecosystems, highlighting its role in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sp. AJR
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sp. AJR
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium sp. AJR contig204, whole genome shotgun sequence.

Gene Summary

Adenine Count

1823939 bp

Thymine Count

1816109 bp

Guanine Count

884260 bp

Cytosine Count

871888 bp

Genome Length

5396196 bp

Protein-coding Genes

4604 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycoside hydrolaseB8T70_14575Not AvailableNegative3310000 - 331136150262.3
pectin esteraseB8T70_14580Not AvailableNegative3311755 - 331262732866.6
pectate lyaseB8T70_14585Not AvailableNegative3312627 - 331375142694.3
glycosyl hydrolase family 88B8T70_14590Not AvailableNegative3313758 - 331498146837.2
glycosyl hydrolase family 88B8T70_14595Not AvailableNegative3315003 - 331618745442.3
duf4861 domain-containing proteinB8T70_14600Not AvailableNegative3316536 - 331750436770.0
esteraseB8T70_14605Not AvailableNegative3317516 - 331845135352.4
ragb/susd family nutrient uptake outer membrane proteinB8T70_14610Not AvailableNegative3318570 - 332027362413.1
susc/raga family tonb-linked outer membrane proteinB8T70_14615Not AvailableNegative3320285 - 3323458115677.0
duf5123 domain-containing proteinB8T70_14620Not AvailableNegative3324486 - 332604256361.9

Displaying genes 2911 – 2920 of 4684 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.