Flavobacterium sp. AJR

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sp. AJR is characterized as a rod-shaped bacterium, which is a defining feature of its morphology. This species possesses flagella, indicating that it is motile, allowing it to navigate its environment effectively. Flavobacterium sp. AJR has a single replicon, which is significant for understanding its genetic structure and replication process. The genomic information for Flavobacterium sp. AJR is cataloged under the accession NCWQ00000000.1. This accession number serves as a reference for researchers seeking to explore its genetic makeup and potential applications in various fields. Flavobacterium species are often associated with aquatic environments and play a crucial role in the degradation of organic matter. Their ability to break down complex organic compounds is essential in nutrient cycling within ecosystems. The motility provided by flagella can aid in the colonization of specific niches, enhancing their ecological role. In summary, Flavobacterium sp. AJR exhibits rod-shaped morphology, possesses flagella, and has a single replicon, with its genetic information available under a specific accession number. The ecological significance of this bacterium lies in its potential contributions to organic matter degradation in aquatic ecosystems, highlighting its role in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sp. AJR
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sp. AJR
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium sp. AJR contig204, whole genome shotgun sequence.

Gene Summary

Adenine Count

1823939 bp

Thymine Count

1816109 bp

Guanine Count

884260 bp

Cytosine Count

871888 bp

Genome Length

5396196 bp

Protein-coding Genes

4604 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ferredoxinB8T70_14320Not AvailableNegative3236435 - 323675211583.0
hypothetical proteinB8T70_14325Not AvailableNegative3236824 - 323729718034.2
fe-s cluster biogenesis protein nfuaB8T70_14330Not AvailableNegative3237612 - 32378518639.44
chromosome partitioning proteinB8T70_14335Not AvailableNegative3238027 - 323915740367.4
l,d-transpeptidaseB8T70_14340Not AvailablePositive3239584 - 324119162156.3
multidrug abc transporter substrate-binding proteinB8T70_14345Not AvailableNegative3241282 - 324371191270.0
phosphonate abc transporter atp-binding proteinB8T70_14350Not AvailableNegative3243832 - 324453325886.3
rnd transporterB8T70_14355Not AvailableNegative3244652 - 324589947451.6
sigma-54-dependent fis family transcriptional regulatorB8T70_14360Not AvailablePositive3246059 - 324740850981.3
histidine kinaseB8T70_14365Not AvailablePositive3247408 - 324873351210.3

Displaying genes 2861 – 2870 of 4684 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.