Candidatus Omnitrophica bacterium CG22_combo_CG10-13_8_21_14_all_43_16

Kingdom

Pseudomonadati

Phylum

Candidatus Omnitrophota

Class

Order

Family

Genus

Description

Candidatus Omnitrophica bacterium CG22_combo_CG10-13_8_21_14_all_43_16 is characterized by having a single replicon, indicating a streamlined genomic structure. The genomic sequence of this bacterium is identified under the accession number PCTH00000000.1, which provides a unique reference for further research and analysis. The presence of only one replicon suggests a simplified genetic organization, which may be advantageous for the organism in specific ecological niches. Such a genomic characteristic might facilitate rapid adaptation to environmental changes, as fewer genetic elements can lead to a more efficient regulatory system. The ecological implications of Candidatus Omnitrophica are noteworthy, as it may play a role in various nutrient cycles or interactions within its habitat. While specific metabolic pathways and ecological interactions are not detailed, the single replicon may be indicative of a lifestyle that requires adaptability in nutrient utilization, potentially allowing it to thrive in diverse environments. In summary, Candidatus Omnitrophica bacterium CG22_combo_CG10-13_8_21_14_all_43_16, with its single replicon and defined genomic accession, exemplifies a streamlined organism that may possess significant ecological flexibility, which could be critical for its survival and function in various ecosystems. Further study of its genomic features will enhance our understanding of its role in microbial communities.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Omnitrophica bacterium CG22_combo_CG10-13_8_21_14_all_43_16


Gene Summary

Adenine Count

351535 bp

Thymine Count

349053 bp

Guanine Count

262915 bp

Cytosine Count

261760 bp

Genome Length

1226160 bp

Protein-coding Genes

1215 genes

Non-Coding Genes

34 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rnaNot AvailableNot AvailablePositive190 - 306Not Available
proline--trna ligaseCOW92_00005Not AvailableNegative1 - 2077900.88
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseCOW92_00010Not AvailableNegative328 - 138037836.9
rip metalloprotease rsepCOW92_00015Not AvailableNegative1368 - 245340113.2
Ncrna_class:otherNot AvailableNot AvailablePositive3133 - 3318Not Available
1-deoxy-d-xylulose-5-phosphate reductoisomeraseCOW92_00020Not AvailableNegative2441 - 358341777.7
hypothetical proteinCOW92_00025Not AvailableNegative3589 - 438929510.9
isoprenyl transferaseCOW92_00030Not AvailableNegative4393 - 509126781.1
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive5200 - 5563Not Available
hypothetical proteinCOW92_00035Not AvailableNegative5174 - 551211920.6

Displaying genes 1 – 10 of 1249 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.