Rickettsia endosymbiont of Culicoides newsteadi str. RiCNE

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Rickettsiaceae

Genus

Rickettsia

Description

Rickettsia endosymbiont of Culicoides newsteadi str. RiCNE is a notable symbiotic bacterium characterized by the presence of flagella and a single replicon. This endosymbiont is associated with the insect host Culicoides newsteadi, a species of biting midge. The presence of flagella suggests that Rickettsia RiCNE may possess motility, which could play a role in its interactions within the host environment or in navigating within its ecological niche. The single replicon indicates a streamlined genetic structure, which is often a characteristic of endosymbiotic bacteria that have adapted to a life closely associated with their hosts. The genomic data for Rickettsia endosymbiont RiCNE is cataloged under the accession number MWZE00000000.1, facilitating further study and analysis of its genetic makeup and potential functions. Understanding the traits of Rickettsia RiCNE within Culicoides newsteadi can provide insights into the dynamics of host-symbiont relationships and the ecological roles these organisms play. The presence of endosymbionts like RiCNE may influence the biology and behavior of their host, potentially affecting the ecological balance within their habitats, such as nutrient cycling or interactions with other organisms. These relationships underscore the importance of microbial symbionts in shaping the ecology of their host species and the environments they inhabit.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyRickettsiaceae
GenusRickettsia
SpeciesRickettsia endosymbiont of Culicoides newsteadi
StrainRiCNE

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rickettsia endosymbiont of Culicoides newsteadi str. RiCNE


Gene Summary

Adenine Count

488798 bp

Thymine Count

486015 bp

Guanine Count

246736 bp

Cytosine Count

234400 bp

Genome Length

1456176 bp

Protein-coding Genes

1352 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transposaseRiCNE_00010Not AvailablePositive4 - 47117579.1
transposaseRiCNE_00020Not AvailablePositive586 - 102016397.2
23s ribosomal rnaNot AvailableNot AvailablePositive1038 - 3785Not Available
udp-n-acetylmuramoyl-l-alanyl-d-glutamate synthetaseRiCNE_00030Not AvailablePositive1046 - 243751293.7
cell division protein ftswRiCNE_00040Not AvailablePositive2430 - 357842535.3
udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferaseRiCNE_00050Not AvailablePositive3575 - 465140370.9
5s ribosomal rnaNot AvailableNot AvailablePositive4173 - 4282Not Available
hypothetical proteinRiCNE_00060Not AvailablePositive4715 - 540126228.3
putative ribosomal n-acetyltransferase ydafRiCNE_00070Not AvailablePositive5662 - 632125402.3
16s ribosomal rnaNot AvailableNot AvailablePositive5829 - 7328Not Available

Displaying genes 1 – 10 of 1390 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

298 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 298 metabolites

Health Effects

No health effects information available for this bacterium.