Citrobacter sp. CFNIH10

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter sp. CFNIH10 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which enable motility. This strain is notable for having five replicons, indicating a complex genomic structure that may contribute to its adaptability in various environments. The genomic data for Citrobacter sp. CFNIH10 is accessible through multiple NCBI accession numbers: NZ_CP026216.1, NZ_CP026212.1, NZ_CP026211.1, NZ_CP026213.1, and NZ_CP026215.1. These accessions provide a resource for researchers interested in the genetic makeup and potential functionalities of this strain. Citrobacter species are commonly found in diverse environments, including soil, water, and the intestines of animals. The presence of flagella in Citrobacter sp. CFNIH10 suggests that it may play a role in its ecological niche by facilitating movement toward nutrient sources or away from harmful conditions. The rod shape and Gram-negative classification also imply the presence of an outer membrane, which can affect its interactions with other organisms and its resistance to certain antibiotics. Overall, Citrobacter sp. CFNIH10 exemplifies the adaptability and ecological significance of rod-shaped, motile, Gram-negative bacteria in various environments, highlighting the importance of understanding their genetic and phenotypic traits for potential applications in biotechnology or microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter sp. CFNIH10
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter sp. CFNIH10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter sp. CFNIH10 plasmid pCIT-a850, complete sequence.

Gene Summary

Adenine Count

30185 bp

Thymine Count

31032 bp

Guanine Count

31995 bp

Cytosine Count

33728 bp

Genome Length

126940 bp

Protein-coding Genes

148 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-alanyl-d-alanine endopeptidaseC2U53_RS26635Not AvailableNegative4626144 - 462709134263.9
yip1 family proteinC2U53_RS26645Not AvailableNegative4627257 - 462784421626.9
deda family proteinC2U53_RS26650Not AvailablePositive4628008 - 462857721234.9
phage polarity suppression proteinC2U53_RS26655Not AvailableNegative4628583 - 462934225762.1
multidrug resistance outer membrane protein mdtqC2U53_RS26660Not AvailableNegative4629410 - 463084952234.7
trna dihydrouridine(16) synthase duscC2U53_RS26665Not AvailableNegative4630994 - 463193234703.9
3-hydroxybenzoate 6-monooxygenaseC2U53_RS26670Not AvailableNegative4632025 - 463321843909.3
maleylacetoacetate isomeraseC2U53_RS26675Not AvailableNegative4633233 - 463387724024.8
fumarylacetoacetate hydrolase family proteinC2U53_RS26680Not AvailableNegative4633886 - 463458725658.6
gentisate 1,2-dioxygenaseC2U53_RS26685Not AvailableNegative4634602 - 463563938993.9

Displaying genes 4801 – 4810 of 5699 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.