Citrobacter sp. CFNIH10

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter sp. CFNIH10 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which enable motility. This strain is notable for having five replicons, indicating a complex genomic structure that may contribute to its adaptability in various environments. The genomic data for Citrobacter sp. CFNIH10 is accessible through multiple NCBI accession numbers: NZ_CP026216.1, NZ_CP026212.1, NZ_CP026211.1, NZ_CP026213.1, and NZ_CP026215.1. These accessions provide a resource for researchers interested in the genetic makeup and potential functionalities of this strain. Citrobacter species are commonly found in diverse environments, including soil, water, and the intestines of animals. The presence of flagella in Citrobacter sp. CFNIH10 suggests that it may play a role in its ecological niche by facilitating movement toward nutrient sources or away from harmful conditions. The rod shape and Gram-negative classification also imply the presence of an outer membrane, which can affect its interactions with other organisms and its resistance to certain antibiotics. Overall, Citrobacter sp. CFNIH10 exemplifies the adaptability and ecological significance of rod-shaped, motile, Gram-negative bacteria in various environments, highlighting the importance of understanding their genetic and phenotypic traits for potential applications in biotechnology or microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter sp. CFNIH10
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter sp. CFNIH10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter sp. CFNIH10 plasmid pCIT-a850, complete sequence.

Gene Summary

Adenine Count

30185 bp

Thymine Count

31032 bp

Guanine Count

31995 bp

Cytosine Count

33728 bp

Genome Length

126940 bp

Protein-coding Genes

148 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
stress response translation initiation inhibitor ycihC2U53_RS23080Not AvailableNegative3991054 - 399138011422.9
orotidine-5'-phosphate decarboxylaseC2U53_RS23085Not AvailableNegative3991380 - 399211726189.5
lipopolysaccharide assembly protein lapbC2U53_RS23090Not AvailableNegative3992294 - 399346344556.6
lapa family proteinC2U53_RS23095Not AvailableNegative3993470 - 399377811362.2
phosphatidylglycerophosphatase bC2U53_RS23100Not AvailableNegative3993929 - 399469329190.1
gtp cyclohydrolase iiC2U53_RS23105Not AvailablePositive3994890 - 399548021753.2
aconitate hydratase acnaC2U53_RS23110Not AvailableNegative3995531 - 399820697590.7
small membrane protein ymicC2U53_RS30445Not AvailableNegative3998540 - 39986353758.74
ymia family putative membrane proteinC2U53_RS23120Not AvailableNegative3998941 - 39990815399.71
hth-type transcriptional regulator cysbC2U53_RS23125Not AvailableNegative3999403 - 400037736302.5

Displaying genes 4331 – 4340 of 5699 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.