Citrobacter sp. CFNIH10

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter sp. CFNIH10 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which enable motility. This strain is notable for having five replicons, indicating a complex genomic structure that may contribute to its adaptability in various environments. The genomic data for Citrobacter sp. CFNIH10 is accessible through multiple NCBI accession numbers: NZ_CP026216.1, NZ_CP026212.1, NZ_CP026211.1, NZ_CP026213.1, and NZ_CP026215.1. These accessions provide a resource for researchers interested in the genetic makeup and potential functionalities of this strain. Citrobacter species are commonly found in diverse environments, including soil, water, and the intestines of animals. The presence of flagella in Citrobacter sp. CFNIH10 suggests that it may play a role in its ecological niche by facilitating movement toward nutrient sources or away from harmful conditions. The rod shape and Gram-negative classification also imply the presence of an outer membrane, which can affect its interactions with other organisms and its resistance to certain antibiotics. Overall, Citrobacter sp. CFNIH10 exemplifies the adaptability and ecological significance of rod-shaped, motile, Gram-negative bacteria in various environments, highlighting the importance of understanding their genetic and phenotypic traits for potential applications in biotechnology or microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter sp. CFNIH10
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter sp. CFNIH10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter sp. CFNIH10 plasmid pCIT-a850, complete sequence.

Gene Summary

Adenine Count

30185 bp

Thymine Count

31032 bp

Guanine Count

31995 bp

Cytosine Count

33728 bp

Genome Length

126940 bp

Protein-coding Genes

148 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methyl-accepting chemotaxis proteinC2U53_RS22125Not AvailableNegative3792636 - 379456769476.6
acid-activated periplasmic chaperone hdebC2U53_RS22130Not AvailableNegative3794725 - 379505411955.3
murr/rpir family transcriptional regulatorC2U53_RS22135Not AvailablePositive3795457 - 379632332589.6
d-alanyl-d-alanine dipeptidaseC2U53_RS22140Not AvailablePositive3796338 - 379692521268.2
abc transporter substrate-binding proteinC2U53_RS22145Not AvailablePositive3796941 - 379849157009.7
abc transporter permeaseC2U53_RS22150Not AvailablePositive3798536 - 379955837350.3
d,d-dipeptide abc transporter permeaseC2U53_RS22155Not AvailablePositive3799555 - 380044231921.0
abc transporter atp-binding proteinC2U53_RS22160Not AvailablePositive3800442 - 380142835997.9
abc transporter atp-binding proteinC2U53_RS22165Not AvailablePositive3801421 - 380234434075.3
peroxiredoxin osmcC2U53_RS22170Not AvailableNegative3802420 - 380285115078.9

Displaying genes 4141 – 4150 of 5699 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.