Citrobacter sp. CFNIH10

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter sp. CFNIH10 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which enable motility. This strain is notable for having five replicons, indicating a complex genomic structure that may contribute to its adaptability in various environments. The genomic data for Citrobacter sp. CFNIH10 is accessible through multiple NCBI accession numbers: NZ_CP026216.1, NZ_CP026212.1, NZ_CP026211.1, NZ_CP026213.1, and NZ_CP026215.1. These accessions provide a resource for researchers interested in the genetic makeup and potential functionalities of this strain. Citrobacter species are commonly found in diverse environments, including soil, water, and the intestines of animals. The presence of flagella in Citrobacter sp. CFNIH10 suggests that it may play a role in its ecological niche by facilitating movement toward nutrient sources or away from harmful conditions. The rod shape and Gram-negative classification also imply the presence of an outer membrane, which can affect its interactions with other organisms and its resistance to certain antibiotics. Overall, Citrobacter sp. CFNIH10 exemplifies the adaptability and ecological significance of rod-shaped, motile, Gram-negative bacteria in various environments, highlighting the importance of understanding their genetic and phenotypic traits for potential applications in biotechnology or microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter sp. CFNIH10
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter sp. CFNIH10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter sp. CFNIH10 plasmid pCIT-a850, complete sequence.

Gene Summary

Adenine Count

30185 bp

Thymine Count

31032 bp

Guanine Count

31995 bp

Cytosine Count

33728 bp

Genome Length

126940 bp

Protein-coding Genes

148 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
f-type conjugal transfer pilus assembly protein trabC2U53_RS01025Not AvailableNegative26949 - 2837349869.7
type-f conjugative transfer system secretin trakC2U53_RS01030Not AvailableNegative28373 - 2911326215.5
type iv conjugative transfer system protein traeC2U53_RS01035Not AvailableNegative29100 - 2966621104.2
type iv conjugative transfer system protein tralC2U53_RS01040Not AvailableNegative29686 - 2999111933.6
type iv conjugative transfer system pilin traaC2U53_RS01045Not AvailableNegative30005 - 3037312881.0
tray domain-containing proteinC2U53_RS01050Not AvailableNegative30423 - 306057081.37
hypothetical proteinC2U53_RS01055Not AvailableNegative30791 - 3146525714.4
conjugal transfer relaxosome dna-binding protein tramC2U53_RS01060Not AvailableNegative31704 - 3209314836.7
transglycosylase slt domain-containing proteinC2U53_RS01065Not AvailablePositive32526 - 3301118185.8
duf5983 family proteinC2U53_RS01070Not AvailableNegative33044 - 3337312663.4

Displaying genes 31 – 40 of 5699 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.