Citrobacter sp. CFNIH10

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter sp. CFNIH10 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which enable motility. This strain is notable for having five replicons, indicating a complex genomic structure that may contribute to its adaptability in various environments. The genomic data for Citrobacter sp. CFNIH10 is accessible through multiple NCBI accession numbers: NZ_CP026216.1, NZ_CP026212.1, NZ_CP026211.1, NZ_CP026213.1, and NZ_CP026215.1. These accessions provide a resource for researchers interested in the genetic makeup and potential functionalities of this strain. Citrobacter species are commonly found in diverse environments, including soil, water, and the intestines of animals. The presence of flagella in Citrobacter sp. CFNIH10 suggests that it may play a role in its ecological niche by facilitating movement toward nutrient sources or away from harmful conditions. The rod shape and Gram-negative classification also imply the presence of an outer membrane, which can affect its interactions with other organisms and its resistance to certain antibiotics. Overall, Citrobacter sp. CFNIH10 exemplifies the adaptability and ecological significance of rod-shaped, motile, Gram-negative bacteria in various environments, highlighting the importance of understanding their genetic and phenotypic traits for potential applications in biotechnology or microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter sp. CFNIH10
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter sp. CFNIH10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter sp. CFNIH10 plasmid pCIT-a850, complete sequence.

Gene Summary

Adenine Count

30185 bp

Thymine Count

31032 bp

Guanine Count

31995 bp

Cytosine Count

33728 bp

Genome Length

126940 bp

Protein-coding Genes

148 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ta system toxin cbta family proteinC2U53_RS13375Not AvailablePositive2054690 - 205503112893.6
duf4942 domain-containing proteinC2U53_RS13380Not AvailablePositive2055146 - 205597932199.7
copg family ribbon-helix-helix proteinC2U53_RS13385Not AvailablePositive2056056 - 20563049018.86
type ii toxin-antitoxin system rele/pare family toxinC2U53_RS13390Not AvailablePositive2056308 - 205658311040.0
helix-turn-helix transcriptional regulatorC2U53_RS13395Not AvailablePositive2056698 - 205749530424.9
epimeraseC2U53_RS13400Not AvailableNegative2057784 - 205853026989.1
(4s)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomeraseC2U53_RS13405Not AvailableNegative2058541 - 205883111241.5
3-hydroxy-5-phosphonooxypentane-2,4-dione thiolaseC2U53_RS13410Not AvailableNegative2058880 - 205975531803.4
autoinducer 2 abc transporter substrate-binding protein lsrbC2U53_RS13415Not AvailableNegative2059784 - 206080636545.6
autoinducer 2 abc transporter permease lsrdC2U53_RS13420Not AvailableNegative2060833 - 206183134642.5

Displaying genes 2661 – 2670 of 5699 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.