Flavobacterium sp. YO12

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sp. YO12 is a rod-shaped bacterium characterized by the presence of flagella, which suggests a potential for motility. This trait can be significant for its ecological interactions, allowing it to navigate its environment effectively. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The accession number for Flavobacterium sp. YO12 is NRQU00000000.1, which provides a reference for researchers seeking to access its genomic data for further studies. Understanding the genetic makeup of Flavobacterium sp. YO12 may offer insights into its metabolic pathways and ecological roles. In ecological terms, the motility provided by flagella may enable Flavobacterium sp. YO12 to interact with diverse substrates and possibly play a role in nutrient cycling within its habitat. Its rod shape and flagella may also influence its interactions with other microorganisms, potentially affecting community dynamics in microbial ecosystems. Overall, Flavobacterium sp. YO12 exemplifies the diversity of the Flavobacterium genus and highlights the importance of morphological and genetic traits in understanding microbial behavior and ecology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sp. YO12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sp. YO12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium sp. YO12 contig00172, whole genome shotgun

Gene Summary

Adenine Count

1597410 bp

Thymine Count

1652825 bp

Guanine Count

797587 bp

Cytosine Count

838490 bp

Genome Length

4886317 bp

Protein-coding Genes

4002 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-isopropylmalate dehydrogenaseBOW55_15985Not AvailableNegative3750684 - 375180240915.4
2-isopropylmalate synthaseBOW55_15990Not AvailableNegative3751865 - 375304042755.4
hypothetical proteinBOW55_15995Not AvailablePositive3753196 - 375474061775.8
peptidase m1BOW55_16000Not AvailableNegative3754976 - 375663163672.4
hypothetical proteinBOW55_16005Not AvailablePositive3756800 - 375749826561.5
hypothetical proteinBOW55_16010Not AvailableNegative3757499 - 375811023598.1
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphataseBOW55_16015Not AvailableNegative3758260 - 375885622346.5
imidazole glycerol phosphate synthase subunit hisfBOW55_16020Not AvailableNegative3758901 - 375965627072.5
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseBOW55_16025Not AvailableNegative3759739 - 376046426587.0
imidazole glycerol phosphate synthase subunit hishBOW55_16030Not AvailableNegative3760564 - 376114521367.6

Displaying genes 3081 – 3090 of 4061 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.