Flavobacterium sp. YO12

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sp. YO12 is a rod-shaped bacterium characterized by the presence of flagella, which suggests a potential for motility. This trait can be significant for its ecological interactions, allowing it to navigate its environment effectively. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The accession number for Flavobacterium sp. YO12 is NRQU00000000.1, which provides a reference for researchers seeking to access its genomic data for further studies. Understanding the genetic makeup of Flavobacterium sp. YO12 may offer insights into its metabolic pathways and ecological roles. In ecological terms, the motility provided by flagella may enable Flavobacterium sp. YO12 to interact with diverse substrates and possibly play a role in nutrient cycling within its habitat. Its rod shape and flagella may also influence its interactions with other microorganisms, potentially affecting community dynamics in microbial ecosystems. Overall, Flavobacterium sp. YO12 exemplifies the diversity of the Flavobacterium genus and highlights the importance of morphological and genetic traits in understanding microbial behavior and ecology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sp. YO12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sp. YO12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium sp. YO12 contig00172, whole genome shotgun

Gene Summary

Adenine Count

1597410 bp

Thymine Count

1652825 bp

Guanine Count

797587 bp

Cytosine Count

838490 bp

Genome Length

4886317 bp

Protein-coding Genes

4002 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ragb/susd family nutrient uptake outer membrane proteinBOW55_15360Not AvailableNegative3601919 - 360339153985.0
susc/raga family proteinBOW55_15365Not AvailableNegative3603408 - 3606539112842.0
hypothetical proteinBOW55_15375Not AvailableNegative3608705 - 360916016884.6
pyridoxamine 5'-phosphate oxidaseBOW55_15380Not AvailableNegative3609377 - 361002124730.0
ribonuclease zBOW55_15385Not AvailableNegative3610182 - 361108734185.2
ribonuclease zBOW55_15390Not AvailableNegative3611191 - 361152312465.0
aspartate carbamoyltransferase catalytic subunitBOW55_15395Not AvailableNegative3611750 - 361267634171.5
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferaseBOW55_15400Not AvailableNegative3612783 - 361332220718.1
hypothetical proteinBOW55_15405Not AvailablePositive3613577 - 361425126298.8
sam-dependent methyltransferaseBOW55_15410Not AvailablePositive3614316 - 361494823947.5

Displaying genes 2961 – 2970 of 4061 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.