Flavobacterium sp. YO12

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sp. YO12 is a rod-shaped bacterium characterized by the presence of flagella, which suggests a potential for motility. This trait can be significant for its ecological interactions, allowing it to navigate its environment effectively. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in various environments. The accession number for Flavobacterium sp. YO12 is NRQU00000000.1, which provides a reference for researchers seeking to access its genomic data for further studies. Understanding the genetic makeup of Flavobacterium sp. YO12 may offer insights into its metabolic pathways and ecological roles. In ecological terms, the motility provided by flagella may enable Flavobacterium sp. YO12 to interact with diverse substrates and possibly play a role in nutrient cycling within its habitat. Its rod shape and flagella may also influence its interactions with other microorganisms, potentially affecting community dynamics in microbial ecosystems. Overall, Flavobacterium sp. YO12 exemplifies the diversity of the Flavobacterium genus and highlights the importance of morphological and genetic traits in understanding microbial behavior and ecology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sp. YO12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sp. YO12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium sp. YO12 contig00172, whole genome shotgun

Gene Summary

Adenine Count

1597410 bp

Thymine Count

1652825 bp

Guanine Count

797587 bp

Cytosine Count

838490 bp

Genome Length

4886317 bp

Protein-coding Genes

4002 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transporterBOW55_11860Not AvailableNegative2789019 - 279033848786.1
tetr/acrr family transcriptional regulatorBOW55_11865Not AvailableNegative2790328 - 279095724344.9
tryptophan synthase subunit alphaBOW55_11870Not AvailableNegative2791237 - 279199828003.7
gamma-glutamylcyclotransferaseBOW55_11880Not AvailableNegative2792449 - 279276611855.3
tryptophan synthase subunit betaBOW55_11885Not AvailableNegative2792850 - 279403143089.6
n-(5'-phosphoribosyl)anthranilate isomeraseBOW55_11890Not AvailableNegative2794044 - 279467623977.0
indole-3-glycerol phosphate synthaseBOW55_11895Not AvailableNegative2794864 - 279564328679.8
anthranilate phosphoribosyltransferaseBOW55_11900Not AvailableNegative2795718 - 279671035838.4
aminodeoxychorismate/anthranilate synthase component iiBOW55_11905Not AvailableNegative2796863 - 279742921061.1
hypothetical proteinBOW55_11910Not AvailableNegative2797521 - 279796717078.4

Displaying genes 2301 – 2310 of 4061 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.