Vibrio palustris

spherefacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio palustris is a Gram-negative, facultative aerobe/anaerobe bacterium characterized by its spherical shape. As an organotroph and chemotroph, it primarily derives energy from organic compounds. This species thrives at an optimal temperature of 25°C and falls within the mesophilic temperature range, indicating its ability to grow in moderate temperature conditions. The genomic structure of Vibrio palustris is notable for having a single replicon, which may influence its genetic stability and adaptability. The organism is cataloged under the accession number FUFT00000000.1, providing a reference point for further genomic analysis and research. The ecological significance of Vibrio palustris is underscored by its metabolic versatility, which enables it to survive in varying oxygen conditions. This adaptability allows it to play a role in diverse environments, contributing to nutrient cycling and potentially influencing microbial communities in aquatic ecosystems. Understanding its metabolism and ecological interactions is crucial for assessing its role in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio palustris
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shapesphere
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio palustris
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceorganotroph; chemotroph
PathogenicityNot Available

Genome Summary

Vibrio palustris


Gene Summary

Adenine Count

1047393 bp

Thymine Count

1047623 bp

Guanine Count

808940 bp

Cytosine Count

797057 bp

Genome Length

3701013 bp

Protein-coding Genes

3323 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Minor spike proteinVPAL9027_03468Not AvailableNegative3685666 - 368665234449.3
Major spike proteinVPAL9027_03469Not AvailableNegative3686661 - 368718819048.7
Capsid proteinVPAL9027_03470Not AvailableNegative3687299 - 368858248485.4
Dna packaging proteinVPAL9027_03471Not AvailableNegative3688619 - 36887354227.24
External scaffolding proteinVPAL9027_03472Not AvailableNegative3688735 - 368919316938.3
CVPAL9027_03473Not AvailableNegative3689190 - 368945010081.0
Dna replication initiation protein gpaVPAL9027_03474Not AvailableNegative3689447 - 369070647940.0
Trna-argNot AvailableNot AvailablePositive8 - 84Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive123 - 233Not Available
Trna-argNot AvailableNot AvailablePositive158 - 234Not Available

Displaying genes 1 – 10 of 3429 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.