Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium parmentieri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium parmentieri strain IFB5427 plasmid pPAR01, complete
Gene Summary
Adenine Count
26586 bp
Thymine Count
24975 bp
Guanine Count
24769 bp
Cytosine Count
25668 bp
Genome Length
101998 bp
Protein-coding Genes
118 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system f family protein | C5E18_RS24165 | Not Available | Positive | 8995 - 9603 | 22646.8 |
| hypothetical protein | C5E18_RS24820 | Not Available | Positive | 10050 - 10223 | 6047.46 |
| type 4 pilus major pilin | C5E18_RS24175 | Not Available | Positive | 10241 - 10630 | 12713.9 |
| lytic transglycosylase domain-containing protein | C5E18_RS24180 | Not Available | Positive | 10679 - 11158 | 17588.4 |
| prepilin peptidase | C5E18_RS24185 | Not Available | Positive | 11159 - 11803 | 23914.1 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | C5E18_RS24190 | Not Available | Positive | 11800 - 12924 | 40460.5 |
| tyrosine-type recombinase/integrase | C5E18_RS24195 | Not Available | Positive | 14027 - 15151 | 43495.9 |
| dotd/trah family lipoprotein | C5E18_RS24200 | Not Available | Positive | 15269 - 15730 | 16889.4 |
| type iv secretory system conjugative dna transfer family protein | C5E18_RS24205 | Not Available | Positive | 15727 - 16521 | 29846.6 |
| plasmid transfer atpase traj | C5E18_RS24210 | Not Available | Positive | 16518 - 17675 | 43108.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
