Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium parmentieri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium parmentieri strain IFB5427 chromosome, complete
Gene Summary
Adenine Count
1272168 bp
Thymine Count
1269239 bp
Guanine Count
1294025 bp
Cytosine Count
1289872 bp
Genome Length
5125304 bp
Protein-coding Genes
4441 genes
Non-Coding Genes
343 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin peptidase | C5E18_RS24120 | Not Available | Positive | 1 - 645 | 23914.1 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | C5E18_RS24125 | Not Available | Positive | 642 - 1748 | 39823.7 |
| tyrosine-type recombinase/integrase | C5E18_RS24130 | Not Available | Positive | 2792 - 3916 | 43495.9 |
| dotd/trah family lipoprotein | C5E18_RS24135 | Not Available | Positive | 4034 - 4495 | 16889.4 |
| type iv secretory system conjugative dna transfer family protein | C5E18_RS24140 | Not Available | Positive | 4492 - 5286 | 29846.6 |
| plasmid transfer atpase traj | C5E18_RS24145 | Not Available | Positive | 5283 - 6440 | 43108.9 |
| icmt/trak family protein | C5E18_RS24150 | Not Available | Positive | 6437 - 6697 | 10448.0 |
| duf5710 domain-containing protein | C5E18_RS24155 | Not Available | Positive | 6712 - 8004 | 47790.4 |
| hypothetical protein | C5E18_RS24160 | Not Available | Positive | 7986 - 8606 | 22823.7 |
| hypothetical protein | C5E18_RS25385 | Not Available | Positive | 8808 - 8945 | 4863.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
