Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium parmentieri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium parmentieri strain IFB5427 plasmid pPAR01, complete
Gene Summary
Adenine Count
26586 bp
Thymine Count
24975 bp
Guanine Count
24769 bp
Cytosine Count
25668 bp
Genome Length
101998 bp
Protein-coding Genes
118 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine--trna ligase | C5E18_RS16535 | Not Available | Positive | 3465499 - 3468081 | 97041.6 |
| lps assembly lipoprotein lpte | C5E18_RS16540 | Not Available | Positive | 3468096 - 3468650 | 20461.6 |
| dna polymerase iii subunit delta | C5E18_RS16545 | Not Available | Positive | 3468647 - 3469672 | 38938.5 |
| nicotinate-nucleotide adenylyltransferase | C5E18_RS16550 | Not Available | Positive | 3469639 - 3470328 | 25950.9 |
| ribosome silencing factor | C5E18_RS16555 | Not Available | Positive | 3470523 - 3470840 | 11453.6 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | C5E18_RS16560 | Not Available | Positive | 3470842 - 3471312 | 17640.4 |
| peptidoglycan dd-transpeptidase mrda | C5E18_RS16565 | Not Available | Positive | 3471346 - 3473250 | 71430.1 |
| peptidoglycan glycosyltransferase mrdb | C5E18_RS16570 | Not Available | Positive | 3473260 - 3474372 | 40571.7 |
| endolytic peptidoglycan transglycosylase rlpa | C5E18_RS16575 | Not Available | Positive | 3474386 - 3475498 | 38984.8 |
| d-alanyl-d-alanine carboxypeptidase daca | C5E18_RS16580 | Not Available | Positive | 3475664 - 3476875 | 44089.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
