Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium parmentieri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium parmentieri strain IFB5427 plasmid pPAR01, complete
Gene Summary
Adenine Count
26586 bp
Thymine Count
24975 bp
Guanine Count
24769 bp
Cytosine Count
25668 bp
Genome Length
101998 bp
Protein-coding Genes
118 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc abc transporter permease subunit znub | C5E18_RS10280 | Not Available | Negative | 2194022 - 2194807 | 27780.4 |
| zinc abc transporter atp-binding protein znuc | C5E18_RS10285 | Not Available | Negative | 2194804 - 2195562 | 27798.2 |
| zinc abc transporter substrate-binding protein znua | C5E18_RS10290 | Not Available | Positive | 2195639 - 2196658 | 37360.6 |
| murein dd-endopeptidase mepm | C5E18_RS10295 | Not Available | Positive | 2196671 - 2197996 | 49362.8 |
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | C5E18_RS10300 | Not Available | Positive | 2198251 - 2199222 | 37548.8 |
| pyruvate kinase | C5E18_RS10305 | Not Available | Negative | 2199337 - 2200779 | 51595.7 |
| murr/rpir family transcriptional regulator | C5E18_RS10310 | Not Available | Negative | 2201036 - 2201908 | 32207.7 |
| glucose-6-phosphate dehydrogenase | C5E18_RS10315 | Not Available | Positive | 2202276 - 2203751 | 55960.8 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | C5E18_RS10320 | Not Available | Positive | 2203918 - 2204559 | 22190.1 |
| formate-dependent phosphoribosylglycinamide formyltransferase | C5E18_RS10325 | Not Available | Negative | 2204654 - 2205832 | 42383.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
