Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium parmentieri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
26586 bp
Thymine Count
24975 bp
Guanine Count
24769 bp
Cytosine Count
25668 bp
Genome Length
101998 bp
Protein-coding Genes
118 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system f family protein | C5E18_RS24165 | Not Available | Positive | 8995 - 9603 | 22646.8 |
| hypothetical protein | C5E18_RS24820 | Not Available | Positive | 10050 - 10223 | 6047.46 |
| type 4 pilus major pilin | C5E18_RS24175 | Not Available | Positive | 10241 - 10630 | 12713.9 |
| lytic transglycosylase domain-containing protein | C5E18_RS24180 | Not Available | Positive | 10679 - 11158 | 17588.4 |
| prepilin peptidase | C5E18_RS24185 | Not Available | Positive | 11159 - 11803 | 23914.1 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | C5E18_RS24190 | Not Available | Positive | 11800 - 12924 | 40460.5 |
| tyrosine-type recombinase/integrase | C5E18_RS24195 | Not Available | Positive | 14027 - 15151 | 43495.9 |
| dotd/trah family lipoprotein | C5E18_RS24200 | Not Available | Positive | 15269 - 15730 | 16889.4 |
| type iv secretory system conjugative dna transfer family protein | C5E18_RS24205 | Not Available | Positive | 15727 - 16521 | 29846.6 |
| plasmid transfer atpase traj | C5E18_RS24210 | Not Available | Positive | 16518 - 17675 | 43108.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
