Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium parmentieri |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium parmentieri strain IFB5427 plasmid pPAR01, complete
Gene Summary
Adenine Count
26586 bp
Thymine Count
24975 bp
Guanine Count
24769 bp
Cytosine Count
25668 bp
Genome Length
101998 bp
Protein-coding Genes
118 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family type i secretion periplasmic adaptor subunit | C5E18_RS05705 | Not Available | Negative | 1208512 - 1209873 | 50636.2 |
| type i secretion system permease/atpase | C5E18_RS05710 | Not Available | Negative | 1209860 - 1212076 | 81030.3 |
| tolc family outer membrane protein | C5E18_RS05715 | Not Available | Negative | 1212156 - 1213508 | 50569.6 |
| hypothetical protein | C5E18_RS25110 | Not Available | Negative | 1214181 - 1214360 | 6715.18 |
| immunoglobulin-like domain-containing protein | C5E18_RS05725 | Not Available | Positive | 1214277 - 1226696 | 411113.0 |
| hypothetical protein | C5E18_RS05730 | Not Available | Positive | 1226756 - 1227100 | 12875.3 |
| cyclic di-gmp receptor lapd | C5E18_RS05735 | Not Available | Negative | 1227223 - 1229175 | 72690.7 |
| cysteine protease lapg | C5E18_RS05740 | Not Available | Negative | 1229185 - 1229874 | 26405.8 |
| n-acetylmuramic acid 6-phosphate etherase | C5E18_RS05745 | Not Available | Positive | 1230014 - 1230940 | 32116.1 |
| phosphatidylglycerophosphatase c | C5E18_RS05750 | Not Available | Positive | 1230973 - 1231611 | 24720.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
