Fibrobacter sp. UWH6

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter sp. UWH6 is a Gram-negative, rod-shaped bacterium that possesses flagella, which suggests it has the capability for motility. This characteristic can be significant in various environments, allowing the organism to navigate through substrates and potentially seek out optimal conditions for growth. The organism contains a single replicon, indicative of a streamlined genetic architecture that may facilitate efficient cellular processes. This trait can be important for the bacterium's adaptation and survival in its ecological niche. Fibrobacter sp. UWH6 is referenced in genomic databases under the accession FRAX00000000.1, providing a resource for further genomic studies and understanding its biological functions. Ecologically, members of the Fibrobacter genus are known for their role in the degradation of cellulose, particularly in anaerobic environments such as the digestive systems of herbivores. This capability is crucial for nutrient cycling within these ecosystems, as it aids in the breakdown of plant material, thereby contributing to the overall energy flow and nutrient dynamics. The motility conferred by flagella may enhance the bacterium's ability to colonize and thrive in such environments, further underscoring its ecological importance.

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter sp. UWH6
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Fibrobacter sp. UWH6
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrobacter sp. UWH6 genome assembly, contig: Ga0136285_150, whole

Gene Summary

Adenine Count

1011978 bp

Thymine Count

995808 bp

Guanine Count

947506 bp

Cytosine Count

965145 bp

Genome Length

3921019 bp

Protein-coding Genes

3258 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hdig domain-containing proteinSAMN05720765_103232Not AvailablePositive1114434 - 111503922375.8
atpase, p-type (transporting), had superfamily, subfamily ic/heavy metal translocating p-type atpaseSAMN05720765_103233Not AvailableNegative1115036 - 111713876034.1
hypothetical proteinSAMN05720765_103234Not AvailableNegative1117174 - 11174018060.76
flavodoxin, short chainSAMN05720765_103235Not AvailableNegative1117488 - 111791614944.6
protein of unknown functionSAMN05720765_103236Not AvailableNegative1117942 - 111850221449.4
hypothetical proteinSAMN05720765_103237Not AvailableNegative1118630 - 111976941012.9
ferrous iron transport protein bSAMN05720765_103238Not AvailableNegative1120041 - 1122911102291.0
ferrous iron transport protein aSAMN05720765_103239Not AvailableNegative1122949 - 112323310490.9
iron (metal) dependent repressor, dtxr familySAMN05720765_103240Not AvailableNegative1123230 - 112366415863.7
heat-inducible transcription repressor hrcaSAMN05720765_103241Not AvailablePositive1123893 - 112528750812.7

Displaying genes 961 – 970 of 3014 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.