Fibrobacter sp. UWH6

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter sp. UWH6 is a Gram-negative, rod-shaped bacterium that possesses flagella, which suggests it has the capability for motility. This characteristic can be significant in various environments, allowing the organism to navigate through substrates and potentially seek out optimal conditions for growth. The organism contains a single replicon, indicative of a streamlined genetic architecture that may facilitate efficient cellular processes. This trait can be important for the bacterium's adaptation and survival in its ecological niche. Fibrobacter sp. UWH6 is referenced in genomic databases under the accession FRAX00000000.1, providing a resource for further genomic studies and understanding its biological functions. Ecologically, members of the Fibrobacter genus are known for their role in the degradation of cellulose, particularly in anaerobic environments such as the digestive systems of herbivores. This capability is crucial for nutrient cycling within these ecosystems, as it aids in the breakdown of plant material, thereby contributing to the overall energy flow and nutrient dynamics. The motility conferred by flagella may enhance the bacterium's ability to colonize and thrive in such environments, further underscoring its ecological importance.

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter sp. UWH6
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Fibrobacter sp. UWH6
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrobacter sp. UWH6 genome assembly, contig: Ga0136285_150, whole

Gene Summary

Adenine Count

1011978 bp

Thymine Count

995808 bp

Guanine Count

947506 bp

Cytosine Count

965145 bp

Genome Length

3921019 bp

Protein-coding Genes

3258 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
o-antigen ligaseSAMN05720765_102136Not AvailableNegative586072 - 58742450848.6
glycosyltransferase involved in cell wall bisynthesisSAMN05720765_102137Not AvailableNegative587428 - 58848338971.6
heparinase ii/iii n-terminusSAMN05720765_102138Not AvailableNegative588480 - 59039072721.1
fn3 associatedSAMN05720765_102139Not AvailablePositive590527 - 59269883054.8
glycosyltransferase involved in cell wall bisynthesisSAMN05720765_102140Not AvailableNegative592732 - 59393145726.6
gdp-mannose 6-dehydrogenaseSAMN05720765_102141Not AvailableNegative593938 - 59525147630.6
udpglucose 6-dehydrogenaseSAMN05720765_102142Not AvailableNegative595267 - 59663750265.2
coth proteinSAMN05720765_102143Not AvailableNegative596682 - 599480104177.0
eama-like transporter family proteinSAMN05720765_102144Not AvailableNegative599576 - 60042130140.7
soluble lytic murein transglycosylaseSAMN05720765_102145Not AvailableNegative600623 - 60295990087.3

Displaying genes 551 – 560 of 3014 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.