Fibrobacter sp. UWH6

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter sp. UWH6 is a Gram-negative, rod-shaped bacterium that possesses flagella, which suggests it has the capability for motility. This characteristic can be significant in various environments, allowing the organism to navigate through substrates and potentially seek out optimal conditions for growth. The organism contains a single replicon, indicative of a streamlined genetic architecture that may facilitate efficient cellular processes. This trait can be important for the bacterium's adaptation and survival in its ecological niche. Fibrobacter sp. UWH6 is referenced in genomic databases under the accession FRAX00000000.1, providing a resource for further genomic studies and understanding its biological functions. Ecologically, members of the Fibrobacter genus are known for their role in the degradation of cellulose, particularly in anaerobic environments such as the digestive systems of herbivores. This capability is crucial for nutrient cycling within these ecosystems, as it aids in the breakdown of plant material, thereby contributing to the overall energy flow and nutrient dynamics. The motility conferred by flagella may enhance the bacterium's ability to colonize and thrive in such environments, further underscoring its ecological importance.

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter sp. UWH6
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Fibrobacter sp. UWH6
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrobacter sp. UWH6 genome assembly, contig: Ga0136285_150, whole

Gene Summary

Adenine Count

1011978 bp

Thymine Count

995808 bp

Guanine Count

947506 bp

Cytosine Count

965145 bp

Genome Length

3921019 bp

Protein-coding Genes

3258 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chc2 zinc fingerSAMN05720765_101204Not AvailableNegative240458 - 24235371687.7
holliday junction endonuclease ruvcSAMN05720765_101205Not AvailablePositive242408 - 24299520961.6
ld-carboxypeptidase ldcb, las superfamilySAMN05720765_101206Not AvailablePositive242992 - 24367826153.4
protein mpaaSAMN05720765_101207Not AvailablePositive243683 - 24439626134.7
cdp-diacylglycerol---serine o-phosphatidyltransferaseSAMN05720765_101208Not AvailableNegative244463 - 24525728931.1
peptide/nickel transport system substrate-binding proteinSAMN05720765_101209Not AvailableNegative245369 - 24714466762.6
pqq-like domain-containing proteinSAMN05720765_101210Not AvailableNegative247263 - 24978594219.6
two-component system, ompr family, alkaline phosphatase synthesis response regulator phop/two-component system, ompr family, response regulator vicrSAMN05720765_101211Not AvailableNegative249775 - 25048527278.8
his kinase a (phospho-acceptor) domain-containing proteinSAMN05720765_101212Not AvailableNegative250488 - 25254878911.0
lysm domain-containing proteinSAMN05720765_101213Not AvailableNegative252671 - 25385544067.7

Displaying genes 241 – 250 of 3014 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.