Fibrobacter sp. UWH4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter sp. UWH4 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is motile due to the presence of flagella, which facilitates its movement in various environments. Genetically, Fibrobacter sp. UWH4 contains a single replicon, indicating a streamlined genetic organization typical of many bacteria. The accession number for Fibrobacter sp. UWH4 is FRAY00000000.1, which provides a reference for genetic and genomic studies related to this strain. The classification within the Fibrobacter genus suggests that it may be involved in the degradation of plant materials, particularly cellulose, as many members of this genus are known for their roles in the breakdown of lignocellulosic biomass. This ability to degrade complex carbohydrates is ecologically significant. Fibrobacter sp. UWH4 likely contributes to the carbon cycling in its environment by aiding in the decomposition of plant matter, which can enhance soil fertility and support various trophic levels. Its role in microbial communities may therefore be vital for nutrient recycling and sustaining ecosystem health. Understanding the specific functions and interactions of Fibrobacter sp. UWH4 can provide insights into microbial ecology and the processes that govern organic matter decomposition.

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter sp. UWH4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Fibrobacter sp. UWH4
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrobacter sp. UWH4 genome assembly, contig: Ga0136283_122, whole

Gene Summary

Adenine Count

905783 bp

Thymine Count

911375 bp

Guanine Count

944993 bp

Cytosine Count

933864 bp

Genome Length

3696015 bp

Protein-coding Genes

3064 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crp/fnr family transcriptional regulator, anaerobic regulatory protein/crp/fnr family transcriptional regulator, cyclic amp receptor proteinSAMN05720762_10534Not AvailablePositive2398270 - 239898326082.7
pasta domain, binds beta-lactamsSAMN05720762_10535Not AvailablePositive2399023 - 239979627904.4
tetratricopeptide repeat-containing proteinSAMN05720762_10536Not AvailablePositive2399805 - 240174872900.6
protein of unknown functionSAMN05720762_10537Not AvailablePositive2401842 - 240355163605.6
ribulose-5-phosphate 3-epimeraseSAMN05720762_10538Not AvailableNegative2403570 - 240426524847.5
glycogen recognition site of amp-activated protein kinaseSAMN05720762_10539Not AvailablePositive2404365 - 240482315805.2
diaminopimelate decarboxylaseSAMN05720762_10540Not AvailablePositive2404995 - 240625746460.4
ribose-phosphate pyrophosphokinaseSAMN05720762_10541Not AvailablePositive2406561 - 240773044460.2
hypothetical proteinSAMN05720762_10542Not AvailablePositive2407930 - 240851419844.3
putative transport proteinSAMN05720762_10543Not AvailableNegative2408631 - 241031359323.4

Displaying genes 2021 – 2030 of 3141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.