Fibrobacter sp. UWH4

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter sp. UWH4 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is motile due to the presence of flagella, which facilitates its movement in various environments. Genetically, Fibrobacter sp. UWH4 contains a single replicon, indicating a streamlined genetic organization typical of many bacteria. The accession number for Fibrobacter sp. UWH4 is FRAY00000000.1, which provides a reference for genetic and genomic studies related to this strain. The classification within the Fibrobacter genus suggests that it may be involved in the degradation of plant materials, particularly cellulose, as many members of this genus are known for their roles in the breakdown of lignocellulosic biomass. This ability to degrade complex carbohydrates is ecologically significant. Fibrobacter sp. UWH4 likely contributes to the carbon cycling in its environment by aiding in the decomposition of plant matter, which can enhance soil fertility and support various trophic levels. Its role in microbial communities may therefore be vital for nutrient recycling and sustaining ecosystem health. Understanding the specific functions and interactions of Fibrobacter sp. UWH4 can provide insights into microbial ecology and the processes that govern organic matter decomposition.

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter sp. UWH4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Fibrobacter sp. UWH4
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrobacter sp. UWH4 genome assembly, contig: Ga0136283_122, whole

Gene Summary

Adenine Count

905783 bp

Thymine Count

911375 bp

Guanine Count

944993 bp

Cytosine Count

933864 bp

Genome Length

3696015 bp

Protein-coding Genes

3064 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05720762_10336Not AvailablePositive1355100 - 135541111638.8
l,d-transpeptidase catalytic domainSAMN05720762_10337Not AvailableNegative1355418 - 135585816346.6
hypothetical proteinSAMN05720762_10338Not AvailableNegative1355967 - 13562189532.25
3-isopropylmalate dehydratase, small subunitSAMN05720762_10339Not AvailableNegative1356894 - 135749621812.0
3-isopropylmalate dehydratase, large subunitSAMN05720762_10340Not AvailableNegative1357516 - 135892550744.0
hypothetical proteinSAMN05720762_10341Not AvailableNegative1359208 - 135965717055.4
murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domainSAMN05720762_10342Not AvailableNegative1359856 - 136138857789.5
hypothetical proteinSAMN05720762_10343Not AvailableNegative1361398 - 136180815553.7
hypothetical proteinSAMN05720762_10344Not AvailablePositive1362215 - 1369492267849.0
por secretion system c-terminal sorting domain-containing proteinSAMN05720762_10345Not AvailablePositive1369743 - 1372610102921.0

Displaying genes 1151 – 1160 of 3141 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.