Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici strain PF008 plasmid pCM1, complete sequence.
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna reductase | AES38_RS02380 | Not Available | Negative | 468134 - 469453 | 45468.1 |
| uroporphyrinogen decarboxylase | AES38_RS02385 | Not Available | Positive | 469568 - 470692 | 39427.5 |
| protoporphyrinogen oxidase | AES38_RS02390 | Not Available | Positive | 470685 - 472124 | 48703.1 |
| hypothetical protein | AES38_RS02395 | Not Available | Positive | 472252 - 472593 | 11732.8 |
| phage holin family protein | AES38_RS02400 | Not Available | Positive | 472626 - 473042 | 14926.6 |
| duf3618 domain-containing protein | AES38_RS02405 | Not Available | Positive | 473032 - 473307 | 10118.3 |
| polyprenol phosphomannose-dependent alpha 1,6 mannosyltransferase mptb | AES38_RS02410 | Not Available | Positive | 473406 - 474968 | 53189.7 |
| tigr03086 family metal-binding protein | AES38_RS02415 | Not Available | Positive | 475066 - 475629 | 20849.3 |
| hydrogen peroxide-dependent heme synthase | AES38_RS02420 | Not Available | Positive | 475699 - 476469 | 28719.0 |
| ferrochelatase | AES38_RS02425 | Not Available | Positive | 476469 - 477719 | 45274.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
