Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici strain PF008 plasmid pCM2, complete sequence.
Gene Summary
Adenine Count
24534 bp
Thymine Count
24566 bp
Guanine Count
47618 bp
Cytosine Count
48831 bp
Genome Length
145549 bp
Protein-coding Genes
143 genes
Non-Coding Genes
1 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AES38_RS14515 | Not Available | Negative | 61 - 246 | 6780.58 |
| thioredoxin domain-containing protein | AES38_RS14520 | Not Available | Negative | 1182 - 1841 | 23785.9 |
| cation transporter | AES38_RS14525 | Not Available | Negative | 1885 - 2568 | 24000.4 |
| helix-turn-helix transcriptional regulator | AES38_RS14530 | Not Available | Negative | 2565 - 2918 | 12504.2 |
| hypothetical protein | AES38_RS14535 | Not Available | Negative | 3216 - 3401 | 6926.72 |
| sinr | AES38_RS14540 | Not Available | Negative | 4102 - 4374 | 10221.2 |
| hypothetical protein | AES38_RS15505 | Not Available | Positive | 4491 - 4736 | 8973.58 |
| replication protein | AES38_RS14545 | Not Available | Positive | 4999 - 6564 | 57134.7 |
| hypothetical protein | AES38_RS14550 | Not Available | Positive | 7053 - 7796 | 27776.1 |
| type ii toxin-antitoxin system hica family toxin | AES38_RS14555 | Not Available | Positive | 8276 - 8485 | 7871.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
