Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Clavibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Clavibacter |
| Species | Clavibacter capsici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Clavibacter capsici strain PF008 plasmid pCM1, complete sequence.
Gene Summary
Adenine Count
6661 bp
Thymine Count
6499 bp
Guanine Count
13653 bp
Cytosine Count
13055 bp
Genome Length
39868 bp
Protein-coding Genes
45 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp2c family serine/threonine-protein phosphatase | AES38_RS00105 | Not Available | Negative | 22950 - 24212 | 45481.6 |
| fha domain-containing protein | AES38_RS00110 | Not Available | Negative | 24217 - 24801 | 20726.9 |
| duf3662 and fha domain-containing protein | AES38_RS00115 | Not Available | Negative | 24798 - 25529 | 26402.0 |
| Trna-leu | Not Available | Not Available | Positive | 25726 - 25812 | Not Available |
| acyltransferase family protein | AES38_RS00125 | Not Available | Negative | 25856 - 27868 | 70064.7 |
| bifunctional lysylphosphatidylglycerol flippase/synthetase mprf | AES38_RS00130 | Not Available | Positive | 28125 - 30377 | 77561.2 |
| response regulator transcription factor | AES38_RS00135 | Not Available | Positive | 30374 - 31063 | 23732.7 |
| sensor histidine kinase | AES38_RS00140 | Not Available | Positive | 31071 - 32255 | 41456.2 |
| type b 50s ribosomal protein l36 | AES38_RS00145 | Not Available | Negative | 32299 - 32421 | 4585.89 |
| gtp-binding protein | AES38_RS00150 | Not Available | Positive | 32466 - 33536 | 37658.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
