Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | DI528_03915 | Not Available | Negative | 894687 - 896606 | 70267.7 |
| hypothetical protein | DI528_03920 | Not Available | Negative | 896611 - 897759 | 42169.3 |
| hypothetical protein | DI528_03925 | Not Available | Negative | 897868 - 898956 | 40682.3 |
| pseudoazurin | DI528_03930 | Not Available | Negative | 899110 - 899562 | 15577.2 |
| cytochrome c family protein | DI528_03935 | Not Available | Negative | 899705 - 900091 | 13240.3 |
| glycine/betaine abc transporter substrate-binding protein | DI528_03940 | Not Available | Positive | 900389 - 901345 | 33987.4 |
| choline abc transporter permease subunit | DI528_03945 | Not Available | Positive | 901438 - 902298 | 30628.7 |
| choline abc transporter atp-binding protein | DI528_03950 | Not Available | Positive | 902295 - 903344 | 37367.2 |
| pyridoxamine 5'-phosphate oxidase | DI528_03955 | Not Available | Positive | 903387 - 904136 | 27281.6 |
| arsr family transcriptional regulator | DI528_03960 | Not Available | Positive | 904252 - 904569 | 11242.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
