Shinella sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Shinella

Description

Shinella sp. is a genus of bacteria that has been identified in environments contaminated with antimony (Sb). This genus is particularly noteworthy due to its ability to thrive in Sb-contaminated sites, suggesting a potential role in bioremediation processes or ecological adaptation to heavy metal pollution. Shinella sp. is characterized by having two replicons, which may contribute to its functional versatility and adaptability in harsh environments. The available genomic data for Shinella sp. can be referenced by the accessions QFOR00000000.1 and QFQX00000000.1, providing a foundation for further studies on its genetic makeup and metabolic capabilities. The presence of Shinella sp. in Sb-contaminated environments indicates its potential significance in biogeochemical cycles, particularly in the transformation and mobility of heavy metals. Understanding the mechanisms by which Shinella sp. interacts with antimony could offer insights into its ecological role and possible applications in environmental cleanup strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusShinella
SpeciesShinella sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatSb-contaminated sites
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Shinella sp. isolate S2_006_000_R2_67

Gene Summary

Adenine Count

1140112 bp

Thymine Count

1149319 bp

Guanine Count

1757384 bp

Cytosine Count

1751118 bp

Genome Length

5797933 bp

Protein-coding Genes

5215 genes

Non-Coding Genes

267 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive1794777 - 1794800Not Available
Putative tail tape measure proteinDI528_08195Not AvailableNegative1799657 - 180229994562.1
Portal proteinDI528_08200Not AvailableNegative1802310 - 180392660343.1
Putative terminase (small subunit)DI528_08205Not AvailableNegative1803923 - 180431514027.8
Head-tail adaptor gp7DI528_08210Not AvailableNegative1804312 - 180462311446.7
duf3168 domain-containing proteinDI528_08215Not AvailableNegative1804623 - 180504214885.0
Hypothetical proteinDI528_08220Not AvailableNegative1805039 - 180547315399.4
Head-tail connector family proteinDI528_08225Not AvailableNegative1805460 - 180579812127.4
Hypothetical proteinDI528_08230Not AvailablePositive1805951 - 180648119414.9
Putative endonucleaseDI528_08235Not AvailableNegative1806487 - 180684913750.3

Displaying genes 1 – 10 of 10043 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.