Shinella sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Shinella

Description

Shinella sp. is a genus of bacteria that has been identified in environments contaminated with antimony (Sb). This genus is particularly noteworthy due to its ability to thrive in Sb-contaminated sites, suggesting a potential role in bioremediation processes or ecological adaptation to heavy metal pollution. Shinella sp. is characterized by having two replicons, which may contribute to its functional versatility and adaptability in harsh environments. The available genomic data for Shinella sp. can be referenced by the accessions QFOR00000000.1 and QFQX00000000.1, providing a foundation for further studies on its genetic makeup and metabolic capabilities. The presence of Shinella sp. in Sb-contaminated environments indicates its potential significance in biogeochemical cycles, particularly in the transformation and mobility of heavy metals. Understanding the mechanisms by which Shinella sp. interacts with antimony could offer insights into its ecological role and possible applications in environmental cleanup strategies.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Alphaproteobacteria
Order	Hyphomicrobiales
Family	Rhizobiaceae
Genus	Shinella
Species	Shinella sp.
Strain	No strain

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Sb-contaminated sites
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

MAG: Shinella sp. isolate S2_003_000_R2_6

QFQX00000000.1 QFOR00000000.1

Gene Summary

Adenine Count

957209 bp

Thymine Count

952480 bp

Guanine Count

1483145 bp

Cytosine Count

1485650 bp

Genome Length

4878484 bp

Protein-coding Genes

4440 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
Integrase	DI528_12930	Not Available	Positive	2776332 - 2777273	34633.7
acetyl-coa carboxylase carboxyl transferase subunit alpha	DI528_12935	Not Available	Positive	2777361 - 2778314	34564.3
hypothetical protein	DI528_12940	Not Available	Positive	2778498 - 2779793	46881.7
response regulator sira	DI528_12945	Not Available	Positive	2779790 - 2780026	8807.75
gtp-binding protein	DI528_12950	Not Available	Negative	2780038 - 2781213	43103.8
Penicillin-binding protein 6b	DI528_12955	Not Available	Negative	2781228 - 2782346	39611.6
amidohydrolase	DI528_12960	Not Available	Positive	2782504 - 2783667	41824.9
Trna,type:arg,anti_codon:cct;	Not Available	Not Available	Positive	2783733 - 2783809	Not Available
Attl	Not Available	Not Available	Positive	2783765 - 2783811	Not Available
Integrase	DI528_12970	Not Available	Negative	2783810 - 2784898	40603.9

Displaying genes 61 – 70 of 10043 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.