Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DI528_02710 | Not Available | Positive | 635937 - 636746 | 28488.7 |
| abc transporter atp-binding protein | DI528_02715 | Not Available | Positive | 636743 - 637525 | 26941.9 |
| branched-chain amino acid abc transporter permease | DI528_02720 | Not Available | Positive | 637522 - 638433 | 31294.9 |
| branched-chain amino acid abc transporter permease | DI528_02725 | Not Available | Positive | 638430 - 639413 | 34088.4 |
| aldo/keto reductase | DI528_02730 | Not Available | Positive | 639416 - 640888 | 53225.8 |
| is5 family transposase | DI528_02735 | Not Available | Positive | 641068 - 642003 | 34101.8 |
| is630 family transposase | DI528_02740 | Not Available | Positive | 642230 - 643159 | 34944.3 |
| Trna-met | Not Available | Not Available | Positive | 643270 - 643346 | Not Available |
| sarcosine oxidase subunit gamma | DI528_02750 | Not Available | Negative | 643394 - 643945 | 19101.8 |
| sarcosine oxidase subunit alpha | DI528_02755 | Not Available | Negative | 643938 - 646931 | 108316.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
