Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DI528_15380 | Not Available | Negative | 3293834 - 3294688 | 30249.2 |
| lysine decarboxylase | DI528_15385 | Not Available | Positive | 3294840 - 3295721 | 32938.7 |
| calcium-binding protein | DI528_15390 | Not Available | Negative | 3295785 - 3296576 | 28351.3 |
| pyrimidine 5'-nucleotidase | DI528_15395 | Not Available | Negative | 3296690 - 3297400 | 26318.2 |
| hypothetical protein | DI528_15400 | Not Available | Positive | 3297504 - 3298406 | 32281.5 |
| hypothetical protein | DI528_15405 | Not Available | Positive | 3298490 - 3299023 | 19272.1 |
| acetylglutamate kinase | DI528_15410 | Not Available | Negative | 3299042 - 3299929 | 31151.1 |
| anti-sigma factor | DI528_15415 | Not Available | Positive | 3300263 - 3300982 | 25662.9 |
| yiha family ribosome biogenesis gtp-binding protein | DI528_15420 | Not Available | Negative | 3301000 - 3301650 | 23639.6 |
| membrane protein insertase yidc | DI528_15425 | Not Available | Negative | 3301740 - 3303545 | 66519.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
