Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein parb | DI528_15130 | Not Available | Positive | 3236112 - 3236993 | 32152.4 |
| dna polymerase iii subunit delta | DI528_15135 | Not Available | Negative | 3237030 - 3238076 | 38487.3 |
| hypothetical protein | DI528_15140 | Not Available | Negative | 3238088 - 3238609 | 18605.4 |
| leucine--trna ligase | DI528_15145 | Not Available | Negative | 3238599 - 3241226 | 97149.6 |
| yggs family pyridoxal phosphate-dependent enzyme | DI528_15150 | Not Available | Positive | 3241429 - 3242088 | 23124.8 |
| propionyl-coa synthetase | DI528_15155 | Not Available | Positive | 3242211 - 3244118 | 69313.2 |
| duf1013 domain-containing protein | DI528_15160 | Not Available | Negative | 3244247 - 3244948 | 26007.7 |
| acetate--coa ligase | DI528_15165 | Not Available | Positive | 3245186 - 3247138 | 72451.3 |
| hypothetical protein | DI528_15170 | Not Available | Negative | 3247195 - 3247365 | 6185.26 |
| nuclease | DI528_15175 | Not Available | Negative | 3247564 - 3248022 | 16354.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
