Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase | DI528_15030 | Not Available | Positive | 3216843 - 3217439 | 21751.5 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DI528_15035 | Not Available | Negative | 3217612 - 3220047 | 89289.4 |
| xre family transcriptional regulator | DI528_15040 | Not Available | Negative | 3220186 - 3220551 | 13404.2 |
| dna repair protein | DI528_15045 | Not Available | Negative | 3220548 - 3221036 | 17728.3 |
| transglycosylase | DI528_15050 | Not Available | Negative | 3221105 - 3222229 | 41070.3 |
| calcium-binding protein | DI528_15055 | Not Available | Negative | 3222226 - 3222924 | 25711.5 |
| membrane protein fxsa | DI528_15060 | Not Available | Positive | 3223077 - 3223571 | 17816.0 |
| protein-export chaperone secb | DI528_15065 | Not Available | Positive | 3223674 - 3224150 | 17273.7 |
| dna polymerase iii subunit epsilon | DI528_15070 | Not Available | Negative | 3224210 - 3224911 | 25669.5 |
| dephospho-coa kinase | DI528_15075 | Not Available | Negative | 3224912 - 3225511 | 22055.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
