Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster insertion protein erpa | DI528_14930 | Not Available | Positive | 3189907 - 3190236 | 11321.2 |
| exodeoxyribonuclease iii | DI528_14935 | Not Available | Positive | 3190241 - 3191029 | 29284.6 |
| exopolysaccharide production negative regulator | DI528_14940 | Not Available | Negative | 3191091 - 3191885 | 28779.8 |
| long-chain fatty acid transporter | DI528_14945 | Not Available | Negative | 3192428 - 3193600 | 41715.5 |
| valine--trna ligase | DI528_14950 | Not Available | Negative | 3194005 - 3196848 | 106690.0 |
| duf2497 domain-containing protein | DI528_14955 | Not Available | Negative | 3196971 - 3197846 | 30849.3 |
| transporter | DI528_14960 | Not Available | Negative | 3198015 - 3199400 | 48758.9 |
| protein-l-isoaspartate o-methyltransferase | DI528_14965 | Not Available | Negative | 3199656 - 3200327 | 23970.6 |
| mannose-1-phosphate guanylyltransferase | DI528_14970 | Not Available | Positive | 3200637 - 3201368 | 26637.2 |
| double-strand break repair protein addb | DI528_14975 | Not Available | Positive | 3201373 - 3204555 | 116242.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
