Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | DI528_14220 | Not Available | Negative | 3046062 - 3047234 | 41313.4 |
| globin | DI528_14225 | Not Available | Positive | 3047557 - 3047946 | 15133.1 |
| duf423 domain-containing protein | DI528_14230 | Not Available | Positive | 3047950 - 3048327 | 12531.7 |
| glyoxalase | DI528_14235 | Not Available | Negative | 3048360 - 3048746 | 15068.7 |
| hypothetical protein | DI528_14240 | Not Available | Negative | 3048797 - 3049060 | 9738.68 |
| duf2325 domain-containing protein | DI528_14245 | Not Available | Negative | 3049060 - 3049449 | 14104.9 |
| 4-hydroxybenzoate 3-monooxygenase | DI528_14250 | Not Available | Negative | 3049627 - 3050796 | 42949.2 |
| arac family transcriptional regulator | DI528_14255 | Not Available | Positive | 3050907 - 3051791 | 32948.4 |
| dihydropyrimidine dehydrogenase | DI528_14260 | Not Available | Positive | 3051908 - 3053269 | 48394.7 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | DI528_14265 | Not Available | Positive | 3053297 - 3054610 | 47487.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
