Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | DI528_14170 | Not Available | Positive | 3033702 - 3034607 | 33661.8 |
| sugar abc transporter permease | DI528_14175 | Not Available | Positive | 3034618 - 3035490 | 31934.9 |
| sugar abc transporter substrate-binding protein | DI528_14180 | Not Available | Positive | 3035519 - 3036835 | 47918.2 |
| alpha-glucosidase/alpha-galactosidase | DI528_14185 | Not Available | Positive | 3037024 - 3038373 | 50697.0 |
| abc transporter atp-binding protein | DI528_14190 | Not Available | Positive | 3038457 - 3039548 | 39793.2 |
| diguanylate cyclase | DI528_14195 | Not Available | Negative | 3040306 - 3042108 | 67315.5 |
| abc transporter atp-binding protein | DI528_14200 | Not Available | Negative | 3042534 - 3043250 | 25607.1 |
| abc transporter atp-binding protein | DI528_14205 | Not Available | Negative | 3043231 - 3043995 | 27396.2 |
| branched-chain amino acid abc transporter permease | DI528_14210 | Not Available | Negative | 3043992 - 3044999 | 34688.5 |
| branched-chain amino acid abc transporter permease | DI528_14215 | Not Available | Negative | 3045002 - 3045865 | 30215.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
