Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1134 domain-containing protein | DI528_14020 | Not Available | Positive | 2999423 - 3000010 | 20736.0 |
| hypothetical protein | DI528_14025 | Not Available | Positive | 3000159 - 3001361 | 44861.9 |
| rna methyltransferase | DI528_14030 | Not Available | Negative | 3001396 - 3002229 | 28994.1 |
| hypothetical protein | DI528_14035 | Not Available | Negative | 3002239 - 3002628 | 13736.8 |
| rna pseudouridine synthase | DI528_14040 | Not Available | Positive | 3002809 - 3003837 | 37541.6 |
| autotransporter outer membrane beta-barrel domain-containing protein | DI528_14045 | Not Available | Positive | 3004101 - 3007091 | 99005.8 |
| eama family transporter | DI528_14050 | Not Available | Negative | 3007147 - 3008145 | 34352.1 |
| transcriptional regulator | DI528_14055 | Not Available | Positive | 3008114 - 3008797 | 25913.3 |
| rna polymerase sigma factor rpoh | DI528_14060 | Not Available | Positive | 3008968 - 3009870 | 34490.3 |
| hypothetical protein | DI528_14065 | Not Available | Negative | 3009977 - 3012289 | 82324.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
