Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DI528_13920 | Not Available | Negative | 2979137 - 2980009 | 31494.0 |
| branched-chain amino acid abc transporter permease | DI528_13925 | Not Available | Negative | 2980009 - 2981400 | 50387.0 |
| branched-chain amino acid abc transporter permease livh | DI528_13930 | Not Available | Negative | 2981405 - 2982307 | 32284.7 |
| glycine cleavage system protein t | DI528_13935 | Not Available | Negative | 2982578 - 2985004 | 88637.8 |
| sarcosine oxidase subunit gamma | DI528_13940 | Not Available | Negative | 2985443 - 2986000 | 19984.9 |
| sarcosine oxidase subunit alpha | DI528_13945 | Not Available | Negative | 2986012 - 2988969 | 106218.0 |
| sarcosine oxidase subunit delta | DI528_13950 | Not Available | Negative | 2988966 - 2989247 | 10623.4 |
| sarcosine oxidase subunit beta | DI528_13955 | Not Available | Negative | 2989257 - 2990510 | 46037.0 |
| 3'(2'),5'-bisphosphate nucleotidase | DI528_13960 | Not Available | Positive | 2990749 - 2991525 | 27241.5 |
| hypothetical protein | DI528_13965 | Not Available | Positive | 2991684 - 2992709 | 35733.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
