Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketol-acid reductoisomerase | DI528_13765 | Not Available | Negative | 2950069 - 2951088 | 36674.1 |
| tetr family transcriptional regulator | DI528_13770 | Not Available | Negative | 2951161 - 2951799 | 23080.6 |
| duf4087 domain-containing protein | DI528_13775 | Not Available | Positive | 2952050 - 2952442 | 13926.6 |
| arsr family transcriptional regulator | DI528_13780 | Not Available | Negative | 2952491 - 2952955 | 17374.9 |
| aspartate racemase | DI528_13785 | Not Available | Positive | 2953116 - 2953808 | 24939.0 |
| marr family transcriptional regulator | DI528_13790 | Not Available | Positive | 2953889 - 2954818 | 35018.8 |
| transcriptional regulator | DI528_13795 | Not Available | Negative | 2954828 - 2955235 | 15441.7 |
| nad(p)-dependent oxidoreductase | DI528_13800 | Not Available | Positive | 2955376 - 2956260 | 30988.1 |
| pyridoxine 5'-phosphate synthase | DI528_13805 | Not Available | Negative | 2956371 - 2957123 | 27314.5 |
| hypothetical protein | DI528_13810 | Not Available | Positive | 2957452 - 2958471 | 38150.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
