Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | DI528_13615 | Not Available | Negative | 2920439 - 2920927 | 18737.7 |
| uracil-dna glycosylase | DI528_13620 | Not Available | Negative | 2920992 - 2921618 | 23694.4 |
| hypothetical protein | DI528_13625 | Not Available | Negative | 2921680 - 2922195 | 18851.1 |
| two-component sensor histidine kinase | DI528_13630 | Not Available | Positive | 2922366 - 2923898 | 55756.1 |
| diacylglycerol kinase | DI528_13635 | Not Available | Negative | 2923923 - 2924333 | 14953.3 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | DI528_13640 | Not Available | Negative | 2924330 - 2925346 | 35021.5 |
| adenosylcobinamide-gdp ribazoletransferase | DI528_13645 | Not Available | Positive | 2925468 - 2926250 | 26137.2 |
| duf1289 domain-containing protein | DI528_13650 | Not Available | Positive | 2926284 - 2926505 | 8500.24 |
| tigr02281 family clan aa aspartic protease | DI528_13655 | Not Available | Positive | 2926502 - 2927203 | 25151.0 |
| diguanylate cyclase response regulator | DI528_13660 | Not Available | Negative | 2927222 - 2928562 | 49522.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
