Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | DI528_13510 | Not Available | Positive | 2896628 - 2899678 | 112792.0 |
| chorismate synthase | DI528_13515 | Not Available | Positive | 2899802 - 2900896 | 39442.9 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | DI528_13520 | Not Available | Positive | 2900906 - 2902006 | 39937.6 |
| alpha/beta hydrolase | DI528_13525 | Not Available | Negative | 2902239 - 2903183 | 33600.6 |
| marr family transcriptional regulator | DI528_13530 | Not Available | Positive | 2903233 - 2903700 | 17733.9 |
| duf971 domain-containing protein | DI528_13535 | Not Available | Negative | 2903729 - 2904091 | 13306.7 |
| gtp 3',8-cyclase moaa | DI528_13540 | Not Available | Positive | 2904316 - 2905305 | 36628.1 |
| hypothetical protein | DI528_13545 | Not Available | Positive | 2905577 - 2905765 | 6614.94 |
| methyl-accepting chemotaxis protein | DI528_13550 | Not Available | Negative | 2905919 - 2908486 | 92000.8 |
| eama family transporter | DI528_13555 | Not Available | Positive | 2908742 - 2909653 | 32649.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
