Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna helicase | DI528_13460 | Not Available | Negative | 2887586 - 2888299 | 26101.7 |
| redox-sensitive transcriptional activator soxr | DI528_13465 | Not Available | Negative | 2888550 - 2888996 | 16131.5 |
| mfs transporter | DI528_13470 | Not Available | Positive | 2889129 - 2890571 | 49035.9 |
| polysaccharide deacetylase | DI528_13475 | Not Available | Positive | 2890741 - 2891787 | 37580.7 |
| pyridoxamine 5'-phosphate oxidase | DI528_13480 | Not Available | Negative | 2891850 - 2892470 | 23769.2 |
| hypothetical protein | DI528_13485 | Not Available | Positive | 2892588 - 2892992 | 14258.7 |
| molecular chaperone dnaj | DI528_13490 | Not Available | Positive | 2893181 - 2894437 | 45042.2 |
| enoyl-[acyl-carrier-protein] reductase fabi | DI528_13495 | Not Available | Positive | 2894560 - 2895378 | 29417.2 |
| histidine phosphatase family protein | DI528_13500 | Not Available | Positive | 2895399 - 2895989 | 22391.4 |
| duf1344 domain-containing protein | DI528_13505 | Not Available | Negative | 2896030 - 2896290 | 9294.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
