Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hi | DI528_13360 | Not Available | Negative | 2868877 - 2869347 | 17405.8 |
| homoserine kinase | DI528_13365 | Not Available | Negative | 2869344 - 2870309 | 35996.3 |
| arac family transcriptional regulator | DI528_13370 | Not Available | Negative | 2870461 - 2871435 | 35377.6 |
| 3-beta hydroxysteroid dehydrogenase | DI528_13375 | Not Available | Positive | 2871556 - 2872449 | 31137.7 |
| hypothetical protein | DI528_13380 | Not Available | Positive | 2872810 - 2873379 | 19716.4 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DI528_13385 | Not Available | Negative | 2873654 - 2874658 | 36315.3 |
| duf1304 domain-containing protein | DI528_13390 | Not Available | Negative | 2874658 - 2875026 | 13191.7 |
| cytochrome c oxidase assembly protein | DI528_13395 | Not Available | Negative | 2875164 - 2875934 | 28324.2 |
| hypothetical protein | DI528_13400 | Not Available | Negative | 2875903 - 2876286 | 13809.9 |
| cytochrome c oxidase subunit 3 | DI528_13405 | Not Available | Negative | 2876458 - 2877333 | 32769.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
