Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03808 family tat-translocated repetitive protein | DI528_13210 | Not Available | Positive | 2836584 - 2837957 | 47341.3 |
| amino acid transporter | DI528_13215 | Not Available | Negative | 2837964 - 2838596 | 21851.4 |
| diguanylate cyclase | DI528_13220 | Not Available | Positive | 2838919 - 2840745 | 65583.8 |
| hypothetical protein | DI528_13225 | Not Available | Negative | 2840753 - 2841307 | 20837.1 |
| glutathione s-transferase | DI528_13230 | Not Available | Positive | 2841622 - 2842281 | 24202.0 |
| duf4406 domain-containing protein | DI528_13235 | Not Available | Negative | 2842556 - 2842912 | 12811.5 |
| deor family transcriptional regulator | DI528_13240 | Not Available | Positive | 2843032 - 2843787 | 26787.6 |
| arac family transcriptional regulator | DI528_13245 | Not Available | Negative | 2843792 - 2844706 | 33094.9 |
| short-chain dehydrogenase/reductase | DI528_13250 | Not Available | Positive | 2844805 - 2845554 | 26349.7 |
| asparaginase | DI528_13255 | Not Available | Negative | 2845752 - 2846759 | 35670.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
