Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1849 domain-containing protein | DI528_12665 | Not Available | Negative | 2730048 - 2730878 | 30309.6 |
| hypothetical protein | DI528_12670 | Not Available | Positive | 2730997 - 2731467 | 15736.2 |
| glycerophosphodiester phosphodiesterase | DI528_12675 | Not Available | Positive | 2731464 - 2732198 | 27314.6 |
| gnat family n-acetyltransferase | DI528_12680 | Not Available | Positive | 2732209 - 2733381 | 43916.8 |
| hit family protein | DI528_12685 | Not Available | Positive | 2733571 - 2733996 | 15304.6 |
| hypothetical protein | DI528_12690 | Not Available | Negative | 2734234 - 2735091 | 31564.3 |
| transcriptional regulator | DI528_12695 | Not Available | Positive | 2735214 - 2736095 | 31741.7 |
| branched-chain amino acid transport | DI528_12700 | Not Available | Negative | 2736136 - 2736471 | 12041.1 |
| azlc family protein | DI528_12705 | Not Available | Negative | 2736468 - 2737220 | 26764.9 |
| duf4440 domain-containing protein | DI528_12710 | Not Available | Negative | 2737410 - 2737826 | 15889.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
