Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | DI528_12615 | Not Available | Negative | 2719546 - 2720013 | 17210.9 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DI528_12620 | Not Available | Negative | 2720006 - 2721070 | 36793.6 |
| outer membrane protein assembly factor bama | DI528_12625 | Not Available | Negative | 2721122 - 2723479 | 85468.8 |
| rip metalloprotease rsep | DI528_12630 | Not Available | Negative | 2723673 - 2724806 | 39939.9 |
| phosphatidate cytidylyltransferase | DI528_12635 | Not Available | Negative | 2724841 - 2725674 | 29242.3 |
| isoprenyl transferase | DI528_12640 | Not Available | Negative | 2725683 - 2726426 | 27435.7 |
| ribosome recycling factor | DI528_12645 | Not Available | Negative | 2726471 - 2727031 | 20764.0 |
| ump kinase | DI528_12650 | Not Available | Negative | 2727084 - 2727806 | 24782.1 |
| elongation factor ts | DI528_12655 | Not Available | Negative | 2727910 - 2728836 | 32183.6 |
| 30s ribosomal protein s2 | DI528_12660 | Not Available | Negative | 2729084 - 2729851 | 28161.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
