Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI528_12515 | Not Available | Negative | 2702443 - 2702628 | 6852.55 |
| gtp cyclohydrolase i fole | DI528_12520 | Not Available | Positive | 2702627 - 2703232 | 22445.9 |
| phosphoribosyl-amp cyclohydrolase | DI528_12525 | Not Available | Positive | 2703282 - 2703749 | 17194.1 |
| patatin | DI528_12530 | Not Available | Positive | 2703853 - 2704806 | 33967.3 |
| cbs domain-containing protein | DI528_12535 | Not Available | Negative | 2704861 - 2705295 | 15761.2 |
| rhomboid family intramembrane serine protease | DI528_12540 | Not Available | Negative | 2705413 - 2706168 | 27547.6 |
| pilus assembly protein pilz | DI528_12545 | Not Available | Positive | 2706512 - 2707123 | 22736.4 |
| transglutaminase | DI528_12550 | Not Available | Positive | 2707765 - 2708343 | 21168.4 |
| hypothetical protein | DI528_12555 | Not Available | Positive | 2708724 - 2709509 | 29083.4 |
| d-alanyl-d-alanine carboxypeptidase | DI528_12560 | Not Available | Positive | 2709643 - 2711097 | 50460.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
