Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI528_12465 | Not Available | Positive | 2694615 - 2694977 | 12313.4 |
| hypothetical protein | DI528_12470 | Not Available | Positive | 2694980 - 2695429 | 15455.4 |
| hypothetical protein | DI528_12475 | Not Available | Negative | 2695481 - 2695669 | 7007.11 |
| response regulator | DI528_12480 | Not Available | Positive | 2695823 - 2696617 | 28850.5 |
| sensor histidine kinase | DI528_12485 | Not Available | Positive | 2696719 - 2697717 | 37373.8 |
| hypothetical protein | DI528_12490 | Not Available | Positive | 2697806 - 2698861 | 38637.6 |
| hypothetical protein | DI528_12495 | Not Available | Positive | 2698979 - 2699323 | 12256.6 |
| threonine--trna ligase | DI528_12500 | Not Available | Negative | 2699531 - 2701390 | 70412.8 |
| membrane protein insertion efficiency factor yidd | DI528_12505 | Not Available | Negative | 2701508 - 2701894 | 14482.2 |
| iron-sulfur cluster assembly scaffold protein | DI528_12510 | Not Available | Negative | 2701899 - 2702348 | 16014.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
