Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Sb-contaminated sites |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
957209 bp
Thymine Count
952480 bp
Guanine Count
1483145 bp
Cytosine Count
1485650 bp
Genome Length
4878484 bp
Protein-coding Genes
4440 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde oxidase | DI528_12365 | Not Available | Negative | 2670243 - 2673389 | 110212.0 |
| (2fe-2s)-binding protein | DI528_12370 | Not Available | Negative | 2673595 - 2674461 | 32498.9 |
| cytosine deaminase | DI528_12375 | Not Available | Negative | 2674458 - 2675852 | 51249.4 |
| glucose-methanol-choline oxidoreductase | DI528_12380 | Not Available | Negative | 2675898 - 2677454 | 55404.4 |
| thiamine pyrophosphate-binding protein | DI528_12385 | Not Available | Negative | 2677624 - 2678232 | 22155.6 |
| sulfopyruvate decarboxylase | DI528_12390 | Not Available | Negative | 2678229 - 2678729 | 18072.9 |
| lysr family transcriptional regulator | DI528_12395 | Not Available | Negative | 2678822 - 2679766 | 34308.9 |
| adenine deaminase | DI528_12400 | Not Available | Negative | 2679772 - 2681580 | 64791.9 |
| glutathione s-transferase family protein | DI528_12405 | Not Available | Negative | 2681845 - 2682477 | 23327.1 |
| oxidoreductase | DI528_12410 | Not Available | Negative | 2682477 - 2683202 | 25247.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
